Stem-loop cbr-mir-64b

Accession

MI0011008

Description

Caenorhabditis briggsae cbr-mir-64b precursor miRNA

Sequence

uccguuauucuuuccgaaggccccgccuuccaugacacccaagcgugucuggaaugacagaaugguccucCGGACCGCUGAUGUGGCAUGaacggcgggaguuggucccuaaaagga
(((..........((((....((((((...((((.(((...((((.(((((((..(((......))).)))))))))))...))).))))...))))))..)))).........)))

Structure

   guuauucuuu    aggc      uuc    a   cca    u       au   ag 
ucc          ccga    cccgcc   caug cac   agcg gucugga  gac  a
|||          ||||    ||||||   |||| |||   |||| |||||||  |||   
agg          gguu    gggcgg   GUAC GUG   UCGC CAGGCcu  cug  a
   -aaaaucccu    --ga      caa    G   UAG    -       -c   gu 

Annotation confidence Not enough data

Genome context

chrIII: 869080-869196 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cbr-mir-64b

Mature cbr-miR-64b

• Accession: MIMAT0011490
• Description: Caenorhabditis briggsae cbr-miR-64b mature miRNA
• Sequence: 71 - CGGACCGCUGAUGUGGCAUG - 90
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074