Stem-loop cbr-mir-2224

Accession

MI0011011

Description

Caenorhabditis briggsae cbr-mir-2224 precursor miRNA

Sequence

uuuuuuuuugagguucgaggcuaucaagcccaaaugaauaccuuucaacuagaauccaaagUUGAGGUAAUCUUUGGUUUUGacagacgauucgagcugaucaugaccuucaaaaagaga
((((((((((((((((((((((.(((((.(((((.((.((((..((((((.........)))))))))).))))))).))))).)).)..))))))))...........)))))))))))

Structure

           -----------        -- -  a     c     u  a    uu      aga 
uuuuuuuuuga           gguucgag  g cu ucaag ccaaa ga uacc  ucaacu   a
|||||||||||           ||||||||  | || ||||| ||||| || ||||  ||||||   u
agagaaaaacu           ucgagcuu  c ga aGUUU GGUUU CU AUGG  AGUUga   c
           uccaguacuag        ag a  c     U     -  A    --      aac 

Annotation confidence Not enough data

Genome context

chrX: 15668995-15669114 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cbr-mir-2224

Mature cbr-miR-2224

• Accession: MIMAT0011493
• Description: Caenorhabditis briggsae cbr-miR-2224 mature miRNA
• Sequence: 62 - UUGAGGUAAUCUUUGGUUUUG - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074