miRBase entry: crm-mir-77-2

Stem-loop crm-mir-77-2


Accession
MI0011022
Description
Caenorhabditis remanei crm-mir-77-2 precursor miRNA
Gene family
MIPF0000272; mir-77


Sequence

uucaaaauaaaaagagcuguuaguuuggauggcugugcucugaggaaacacggugucauUUCAUCAGGCCAUAGCUGUCCaaaacucguuuccccacuaaagcgguuaagagguuuugga
............(((((...(((((.....))))).)))))....................................(((((((((..((..(((......).))..))..)))))))))

Structure
uucaaaauaaaaagagcuguuaguuuggauggcugugcucugaggaaacacggugucauUUCAUCAGGCCAUAGCUG         cg  uc  - ac 
                                                                             UCCaaaacu  uu  cc c  u
                                                                             |||||||||  ||  || |   
                                                                             agguuuugg  aa  gg g  a
-----------------------------------------------------------------------------         ag  uu  c aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Crem_Contig41: 671584-671703 [-]

Database links

Mature crm-miR-77

Accession MIMAT0011507
Description Caenorhabditis remanei crm-miR-77 mature miRNA
Sequence 60 - UUCAUCAGGCCAUAGCUGUCC - 80
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755563
    Repertoire and evolution of miRNA genes in four divergent nematode species
    "de Wit E, Linsen SE, Cuppen E, Berezikov E"
    "Genome Res (2009) 19:2064-2074