Stem-loop crm-mir-35f

Accession

MI0011030

Description

Caenorhabditis remanei crm-mir-35f precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

auugcacuugacgacgggaacagugcugaugccgaccuugguaauaggacuaaacugugacaagcuaUCACCGGGUGGGCAUUGGUUCUggucccuuagucauccuauugugau
((((((..((((...((((.(((.(((((((((.((((.(((.((((.................)))).))))))).))))))))).))).))))...))))......))))))

Structure

      ----cu    gac    a   u         g    u   a    gacuaaa 
auugca      ugac   ggga cag gcugaugcc accu ggu auag       c
||||||      ||||   |||| ||| ||||||||| |||| ||| ||||       u
uagugu      acug   cccu gUC UGGUUACGG UGGG CCA Uauc       g
      uauccu    auu    g   U         G    -   C    gaacagu 

Annotation confidence Not enough data

Genome context

Crem_Contig93: 223206-223319 [-]

Clustered miRNAs

15 other miRNAs are < 10 kb from crm-mir-35f

Mature crm-miR-35f

• Accession: MIMAT0011514
• Description: Caenorhabditis remanei crm-miR-35f mature miRNA
• Sequence: 68 - UCACCGGGUGGGCAUUGGUUCU - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074