Stem-loop sequence crm-mir-61

Accession MI0011044
Description Caenorhabditis remanei miR-61 stem-loop
Gene family MIPF0000297; mir-61
Stem-loop 
-  guaa      uc               c  cg  u    c  -   a 
 gc    uaucgg  uuccgaguuggguca gg  cu aguc uu ccg c
 ||    ||||||  ||||||||||||||| ||  || |||| || ||| a
 cg    guagcc  agggcucgacucggu cc  ga ucag aa ggu u
a  ---a      uc               u  aa  -    u  c   a
Get sequence
Deep sequencing
87 reads, 1 experiments
Genome context
Coordinates (WS200) Overlapping transcripts
Crem_Contig5: 484744-484840 [-]
intergenic
Clustered miRNAs
< 10kb from crm-mir-61
crm-mir-61 Crem_Contig5: 484744-484840 [-]
crm-mir-250 Crem_Contig5: 484593-484712 [-]

Mature sequence crm-miR-61

Accession MIMAT0011526
Sequence

59 -  

ugacuagaaccuuggcucagc

 - 79

Get sequence
Deep sequencing 87 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).