Stem-loop crm-mir-85

Accession

MI0011049

Description

Caenorhabditis remanei crm-mir-85 precursor miRNA

Gene family

MIPF0000249; mir-85

Sequence

agaagacguucugaagucggagcccgucuuuccaauauuuugaaaccaguacucaugcaaaugguUACAAAGUAUUCGAAAAGGCGUGCucugagaagagcucuuc
.(((((.(((((....(((((((.((((((((.(((((((((.(((((.............))))).))))))))).).))))))).)))))))..))))))))))

Structure

a     c     gaag       c       - c         a     guacu 
 gaaga guucu    ucggagc cgucuuu c aauauuuug aacca     c
 ||||| |||||    ||||||| ||||||| | ||||||||| |||||     a
 cuucu cgaga    agucuCG GCGGAAA G UUAUGAAAC Uuggu     u
-     -     --ag       U       A C         A     aaacg 

Annotation confidence Not enough data

Genome context

Crem_Contig1: 563160-563265 [+]

Mature crm-miR-85

• Accession: MIMAT0011531
• Description: Caenorhabditis remanei crm-miR-85 mature miRNA
• Sequence: 66 - UACAAAGUAUUCGAAAAGGCGUGC - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074