Stem-loop crm-mir-82

Accession

MI0011058

Description

Caenorhabditis remanei crm-mir-82 precursor miRNA

Gene family

MIPF0000154; mir-81

Sequence

aaguucuucuagcgacagguuuucccugugaucugcagaguacaaagaaauacaucUGAGAUCAUCGUGAAAGCCAGUuguuuccaagaacu
.(((((((..((((((.(((((((.(.(((((((.(((((((........))).))))))))))).).))))))).))))))...)))))))

Structure

a       -cu      a       c u       g    -   caa 
 aguucuu   agcgac gguuuuc c gugaucu caga gua   a
 |||||||   |||||| ||||||| | ||||||| |||| |||    
 ucaagaa   uuguUG CCGAAAG G UACUAGA GUcu cau   g
-       ccu      A       U C       -    a   aaa 

Annotation confidence Not enough data

Genome context

Crem_Contig15: 1754400-1754491 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from crm-mir-82

Mature crm-miR-82

• Accession: MIMAT0011539
• Description: Caenorhabditis remanei crm-miR-82 mature miRNA
• Sequence: 57 - UGAGAUCAUCGUGAAAGCCAGU - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074