Stem-loop crm-mir-230

Accession

MI0011068

Description

Caenorhabditis remanei crm-mir-230 precursor miRNA

Gene family

MIPF0000306; mir-230

Sequence

gauguuguaccgauACUUGGUCGACAAUCUAAUAUUaucgguucugccagaagauaGUAUUAGUUGUGCGACCAGGAGacgguauuuaacauca
((((((((((((...((((((((((((.((((((((((((((...)))....))))))))))))))).))))))))...))))))..)))))).

Structure

-      --      auA        -    U           ----   u 
 gauguu  guaccg   CUUGGUCG ACAA CUAAUAUUauc    ggu  
 ||||||  ||||||   |||||||| |||| |||||||||||    ||| c
 cuacaa  uauggc   GGACCAGC UGUU GAUUAUGauag    ccg  
a      uu      aGA        G    -           aaga   u 

Annotation confidence Not enough data

Genome context

Crem_Contig0: 2006530-2006623 [-]

Mature crm-miR-230-5p

• Accession: MIMAT0011547
• Description: Caenorhabditis remanei crm-miR-230-5p mature miRNA
• Sequence: 15 - ACUUGGUCGACAAUCUAAUAUU - 36
• Evidence: experimental ; 454 [1]

Mature crm-miR-230-3p

• Accession: MIMAT0011548
• Description: Caenorhabditis remanei crm-miR-230-3p mature miRNA
• Sequence: 57 - GUAUUAGUUGUGCGACCAGGAG - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074