Stem-loop crm-mir-2

Accession

MI0011082

Description

Caenorhabditis remanei crm-mir-2 precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

auaguauacggaaagcCCGUCAAAGUGGCUCGUGUUAUGUugaaucuugaaguaaucaUAUCACAGCCAGCUUUGAUGUGCuuccugaaguacuau
(((((((.(((.((((.(((((((((((((.(((.((((.................)))).)))))))).)))))))).)))).)))..)))))))

Structure

       -a   a    C        -     C   U    Uugaauc 
auaguau  cgg aagc CGUCAAAG UGGCU GUG UAUG       u
|||||||  ||| |||| |||||||| ||||| ||| ||||       u
uaucaug  guc uuCG GUAGUUUC ACCGA CAC AUac       g
       aa   c    U        G     -   U    uaaugaa 

Annotation confidence Not enough data

Genome context

Crem_Contig68: 361255-361350 [-]

Mature crm-miR-2-5p

• Accession: MIMAT0011573
• Description: Caenorhabditis remanei crm-miR-2-5p mature miRNA
• Sequence: 17 - CCGUCAAAGUGGCUCGUGUUAUGU - 40
• Evidence: experimental ; 454 [1]

Mature crm-miR-2-3p

• Accession: MIMAT0011574
• Description: Caenorhabditis remanei crm-miR-2-3p mature miRNA
• Sequence: 59 - UAUCACAGCCAGCUUUGAUGUGC - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074