Stem-loop sequence crm-mir-250

Accession MI0011085
Description Caenorhabditis remanei miR-250 stem-loop
Gene family MIPF0000283; mir-250
Stem-loop 
     -uauucga   uc   --      cc  u    u     c     c  -   acuu 
gcugu        agg  uuc  ggaccg  cc ucag ugacu gugau cg ccg    u
|||||        |||  |||  ||||||  || |||| ||||| ||||| || |||    g
uggua        ucc  aag  ucuggc  gg aguc acuga cacua gc ggu    a
     uuauuaua   uu   uu      au  u    c     -     a  a   auau
Get sequence
Deep sequencing
3 reads, 1 experiments
Genome context
Coordinates (WS200) Overlapping transcripts
Crem_Contig5: 484593-484712 [-]
intergenic
Clustered miRNAs
< 10kb from crm-mir-250
crm-mir-61 Crem_Contig5: 484744-484840 [-]
crm-mir-250 Crem_Contig5: 484593-484712 [-]

Mature sequence crm-miR-250-5p

Accession MIMAT0011579
Previous IDs crm-miR-250*
Sequence

29 -  

ccuucaguugacucgugauccg

 - 50

Get sequence
Evidence experimental; 454 [1]

Mature sequence crm-miR-250-3p

Accession MIMAT0011580
Previous IDs crm-miR-250
Sequence

71 -  

aaucacagucaccugauggu

 - 90

Get sequence
Deep sequencing 3 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).