Stem-loop crm-mir-253

Accession

MI0011107

Description

Caenorhabditis remanei crm-mir-253 precursor miRNA

Gene family

MIPF0000286; mir-253

Literature search

1 open access papers mention crm-mir-253
(1 sentences)

Sequence

guucgaguuuccacccuuuucacacaccucacuaacacuaaacacagauugauagaugUUAGUAGGCGUUGUGGGAAGggcggcgaugacgagc
(((((.(((.((.((((((((((((.(((.((((((((((............))).)))))))))).).))))))))))).)).)))..)))))

Structure

     -a   u  a           - a   c       -   aacac 
guucg  guu cc cccuuuucaca c ccu acuaaca cua     a
|||||  ||| || ||||||||||| | ||| ||||||| |||      
cgagc  uag gg ggGAAGGGUGU G GGA UGAUUgu gau     g
     ag   c  c           U C   -       a   aguua 

Annotation confidence Not enough data

Genome context

Crem_Contig8: 1135636-1135729 [-]

Mature crm-miR-253

• Accession: MIMAT0011609
• Description: Caenorhabditis remanei crm-miR-253 mature miRNA
• Sequence: 59 - UUAGUAGGCGUUGUGGGAAG - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074