miRBase entry: crm-mir-245

Stem-loop crm-mir-245


Accession
MI0011108
Description
Caenorhabditis remanei crm-mir-245 precursor miRNA
Gene family
MIPF0000257; mir-245


Sequence

aaaguacucaaugucgaagagcugcuugcaagguaccuaauuguuugcacauuucucaAUUGGUCCCCUCCAAGUAGCUCuauugcauuguuuguuuua
((((((..(((((.((((((((((((((...((.(((.(((((.............)))))))).))...))))))))))).))))))))..)))))).

Structure
-      cu     u   -           caa  u   u     uuugc 
 aaagua  caaug cga agagcugcuug   gg acc aauug     a
 ||||||  ||||| ||| |||||||||||   || ||| |||||     c
 uuuugu  guuac guu uCUCGAUGAAC   CC UGG UUAac     a
a      uu     -   a           CUC  C   -     ucuuu 


Annotation confidence Not enough data
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Genome context
Crem_Contig143: 167381-167479 [+]

Database links

Mature crm-miR-245

Accession MIMAT0011610
Description Caenorhabditis remanei crm-miR-245 mature miRNA
Sequence 59 - AUUGGUCCCCUCCAAGUAGCUC - 80
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755563
    Repertoire and evolution of miRNA genes in four divergent nematode species
    "de Wit E, Linsen SE, Cuppen E, Berezikov E"
    "Genome Res (2009) 19:2064-2074