miRBase entry: ppc-mir-37

Stem-loop ppc-mir-37


Accession
MI0011135
Description
Pristionchus pacificus ppc-mir-37 precursor miRNA


Sequence

ucugagucccuucgaucgccucugaucacuacgaugaaacugagauaacgaguuuUCACCGGGUGAACAGAAGCUGUugaagauaucggaa
(((((....(((((((.((.((((.(((((.((.(((((((.........)).))))).))))))).)))).)).)))))))...))))).

Structure
-     gucc       c  c    a     a  a     -  gag 
 ucuga    cuucgau gc ucug ucacu cg ugaaa cu   a
 |||||    ||||||| || |||| ||||| || ||||| ||   u
 aggcu    gaaguUG CG AGAC AGUGG GC ACUuu ga   a
a     -aua       U  A    A     -  C     u  gca 


Annotation confidence Not enough data
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Genome context
ABKE03000123.1: 8322295-8322385 [-]

Database links

Mature ppc-miR-37

Accession MIMAT0011647
Description Pristionchus pacificus ppc-miR-37 mature miRNA
Sequence 56 - UCACCGGGUGAACAGAAGCUGU - 77
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755563
    Repertoire and evolution of miRNA genes in four divergent nematode species
    "de Wit E, Linsen SE, Cuppen E, Berezikov E"
    "Genome Res (2009) 19:2064-2074