Stem-loop sequence ppc-lin-4

Accession MI0011136
Description Pristionchus pacificus lin-4 stem-loop
Stem-loop 
c    c  -    ugcu    aa      u  c     c     -       ga   a 
 caca ca cgac    agca  uggcgu cc ugaga cucaa uugugau  gau c
 |||| || ||||    ||||  |||||| || ||||| ||||| |||||||  |||  
 gugu gu gcug    ucgu  aucgca gg acucu gaguu ggcacug  cug g
-    u  a    ---u    --      c  u     c     u       -a   a
Get sequence
Deep sequencing
103 reads, 1 experiments
Genome context
Coordinates (WS200) Overlapping transcripts
Ppa_Contig61: 388674-388782 [+]
intergenic

Mature sequence ppc-lin-4

Accession MIMAT0011648
Sequence

29 -  

ucccugagaccucaauugug

 - 48

Get sequence
Deep sequencing 103 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).