miRBase entry: ppc-mir-81

Stem-loop ppc-mir-81


Accession
MI0011148
Description
Pristionchus pacificus ppc-mir-81 precursor miRNA
Gene family
MIPF0000154; mir-81


Sequence

ucacucccggcaugcgguuuucacguugaucugagagcuaaucgauauguuucUGAGAUCAUAGUGAAAGCUACUugccgaaguga
(((((..(((((.(.(((((((((..((((((.(((((..........).)))).))))))..))))))))).).))))).)))))

Structure
     cc     u c         gu      g    - uaau 
ucacu  cggca g gguuuucac  ugaucu agag c    c
|||||  ||||| | |||||||||  |||||| |||| |     
aguga  gccgu C UCGAAAGUG  ACUAGA Ucuu g    g
     -a     U A         AU      G    u uaua 


Annotation confidence Not enough data
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Genome context
ABKE03000007.1: 508615-508700 [-]

Database links

Mature ppc-miR-81

Accession MIMAT0011656
Description Pristionchus pacificus ppc-miR-81 mature miRNA
Sequence 54 - UGAGAUCAUAGUGAAAGCUACU - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755563
    Repertoire and evolution of miRNA genes in four divergent nematode species
    "de Wit E, Linsen SE, Cuppen E, Berezikov E"
    "Genome Res (2009) 19:2064-2074