Stem-loop ppc-mir-2252

Accession

MI0011160

Description

Pristionchus pacificus ppc-mir-2252 precursor miRNA

Sequence

gagggguggcacucggucuagaauuugacagauuaccgcaaaucugUCCUUCUAGCCCGAAGUGUCAGaaaauaauccua
..((((((((((((((.((((((...((((((((......)))))))).)))))).))).)))))))........)))).

Structure

ga    --------       -   u      uuu        ac 
  gggg        uggcacu cgg cuagaa   gacagauu  c
  ||||        ||||||| ||| ||||||   ||||||||   
  uccu        ACUGUGA GCC GAUCUU   CUgucuaa  g
-a    aauaaaaG       A   C      --C        ac 

Annotation confidence Not enough data

Genome context

ABKE03000089.1: 1839992-1840071 [-]

Mature ppc-miR-2252

• Accession: MIMAT0011667
• Description: Pristionchus pacificus ppc-miR-2252 mature miRNA
• Sequence: 47 - UCCUUCUAGCCCGAAGUGUCAG - 68
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074