Stem-loop ppc-mir-2253a

Accession

MI0011168

Description

Pristionchus pacificus ppc-mir-2253a precursor miRNA

Gene family

MIPF0000915; mir-2253

Sequence

gcuucggacuuucaacaggccauacaccucgugugaugCAUGGCACUGCUGAAGGUUCGaaagc
((((((((((((((.((((((((.((.(......).)).))))).))).)))))))))).))))

Structure

    -          a   -     a  c uc 
gcuu cggacuuuca cag gccau ca c  g
|||| |||||||||| ||| ||||| || |   
cgaa GCUUGGAAGU GUC CGGUA gu g  u
    a          C   A     C  a ug 

Annotation confidence Not enough data

Genome context

ABKE03000087.1: 518488-518551 [-]

Mature ppc-miR-2253a

• Accession: MIMAT0011675
• Description: Pristionchus pacificus ppc-miR-2253a mature miRNA
• Sequence: 39 - CAUGGCACUGCUGAAGGUUCG - 59
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074