Stem-loop ppc-mir-232

Accession

MI0011202

Description

Pristionchus pacificus ppc-mir-232 precursor miRNA

Sequence

uucuucaaugaaaucgcccaucguagucaguugcauucuuucggaucaauuagaucuaucgaaUAAAUGCAUCUACACUUCGGUGGacgauuugaaga
.(((((((....((((.((((((.(((.((.((((((..((((((((.....))))...))))..)))))).))..))).)))))).)))))))))))

Structure

u       ugaa    c      u   -c  u      cu    ---    a 
 ucuucaa    aucg ccaucg agu  ag ugcauu  uucg   gauc a
 |||||||    |||| |||||| |||  || ||||||  ||||   |||| u
 agaaguu    uagc GGUGGC UCA  UC ACGUAA  aagc   cuag u
-       ----    a      U   CA  U      AU    uau    a 

Annotation confidence Not enough data

Genome context

ABKE03000070.1: 1947450-1947547 [+]

Mature ppc-miR-232

• Accession: MIMAT0011699
• Description: Pristionchus pacificus ppc-miR-232 mature miRNA
• Sequence: 64 - UAAAUGCAUCUACACUUCGGUGG - 86
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074