Stem-loop sequence ppc-mir-2238d

Accession MI0011213
Description Pristionchus pacificus miR-2238d stem-loop
Gene family MIPF0000822; mir-2238
Stem-loop 
-       a c    aauuc          cg  c   a     a    ugau 
 uuuaccg g aguc     ccuuuucguu  cu cac uguca ucgu    u
 ||||||| | ||||     ||||||||||  || ||| ||||| ||||     
 aaguggc c ucag     ggaagagcgg  ga gug acagu agca    c
c       - -    ---au          ua  c   a     a    ugag
Get sequence
Deep sequencing
8 reads, 1 experiments
Genome context
Coordinates (WS200) Overlapping transcripts
Ppa_Contig129: 131258-131359 [+]
intergenic

Mature sequence ppc-miR-2238d

Accession MIMAT0011710
Sequence

62 -  

aaugacaagugcagauggcgag

 - 83

Get sequence
Deep sequencing 8 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19755563 "Repertoire and evolution of miRNA genes in four divergent nematode species" de Wit E, Linsen SE, Cuppen E, Berezikov E Genome Res. 19:2064-2074(2009).