Stem-loop ppc-mir-67

Accession

MI0011216

Description

Pristionchus pacificus ppc-mir-67 precursor miRNA

Sequence

uaccguaguccacgguucaccucaacgcccucuguggguugucugacucacagugagaucagucACACAACCUCCUAGAGUGUGUCGagguucgugaucuaccgua
(((.((((..(((((...(((((.((((.(((((.(((((((((((((((...)))).))))....)))))))..))))).)))).))))))))))..)))).)))

Structure

   c    uc     uuc     a    c     -u       ----    -    c 
uac guag  cacgg   accuc acgc cucug  ggguugu    cuga cuca  
||| ||||  |||||   ||||| |||| |||||  |||||||    |||| |||| a
aug cauc  gugcu   uggaG UGUG GAGAU  UCCAACA    gacu gagu  
   c    ua     ---     C    U     CC       CAcu    a    g 

Annotation confidence Not enough data

Genome context

ABKE03000059.1: 307331-307436 [+]

Mature ppc-miR-67

• Accession: MIMAT0011713
• Description: Pristionchus pacificus ppc-miR-67 mature miRNA
• Sequence: 65 - ACACAACCUCCUAGAGUGUGUCG - 87
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074