Stem-loop ppc-mir-2247

Accession

MI0011243

Description

Pristionchus pacificus ppc-mir-2247 precursor miRNA

Sequence

uccucgauuuaccgacUCUCCCCAUUCCUUGUGAUUGCUgacgacuauauaaagucaucauauugaauagggaggcucaguucaaucgcugac
((..(((((.((.((.((((((.((((..((((((.(((.............))).))))))..)))).)))))).)).))..)))))..)).

Structure

-  cu     -u  c  c      C    CU      U   gacga 
 uc  cgauu  ac ga UCUCCC AUUC  UGUGAU GCU     c
 ||  |||||  || || |||||| ||||  |||||| |||     u
 ag  gcuaa  ug cu ggaggg uaag  auacua uga     a
c  uc     cu  a  c      a    uu      c   aauau 

Annotation confidence Not enough data

Genome context

ABKE03000107.1: 4533559-4533651 [-]

Mature ppc-miR-2247

• Accession: MIMAT0011735
• Description: Pristionchus pacificus ppc-miR-2247 mature miRNA
• Sequence: 17 - UCUCCCCAUUCCUUGUGAUUGCU - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074