Accession
MI0011260
Description
Oryza sativa
osa-MIR2118j precursor miRNA
Gene family
MIPF0000745;
MIR2118
Literature search
28 open access papers mention osa-MIR2118j
(163 sentences)
(163 sentences)
Sequence
16
reads,
0
reads per million, 2 experiments
ggugagccaggaagaggaagagagacucuaagagcaguaggaaugggaacaugaaggaaagccaaauuaagcucuaaccucugguauuggagauuuggucugaugauuUUCCUGAUGCCUCCCAUUCCUAuaguucuuaggugcucguuccucuuacuuucagcuaacacc
(((((((.(((((((((((..(((((.((((((((.((((((((((((.(((..(((((((((((((....((((((((...)))..))))))))))))........)))))).)))..)))))))))))).)))))))))).))).)))))))).)))...)))..))))
(((((((.(((((((((((..(((((.((((((((.((((((((((((.(((..(((((((((((((....((((((((...)))..))))))))))))........)))))).)))..)))))))))))).)))))))))).))).)))))))).)))...)))..))))
Structure
-- --c - ga - u a -a ga -------- uaag -- u
ggug agc agg aagaggaa gag ac cuaagagc guaggaauggga cau aggaaa gccaaau cucua acc
|||| ||| ||| |||||||| ||| || |||||||| |||||||||||| ||| |||||| ||||||| ||||| ||| c
ccac ucg uuc uucuccuu cuc ug gauucuug uAUCCUUACCCU GUA UCCUUu ugguuua gaggu ugg
aa acu a -g g - a CC -G uaguaguc ---- ua u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr4: 21654594-21654764 [-]
Clustered miRNAs
15 other miRNAs are < 10 kb from osa-MIR2118j
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR2118j
| Accession | MIMAT0011749 |
| Description | Oryza sativa osa-miR2118j mature miRNA |
| Sequence | 109 - UUCCUGAUGCCUCCCAUUCCUA - 130 |
| Evidence |
experimental
454 [1] |
References
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