Stem-loop sequence osa-MIR2275b

Accession MI0011270
Description Oryza sativa miR2275b stem-loop
Gene family MIPF0000797; MIR2275
Stem-loop 
u           u      -     u gg          -------a    ag 
 ggcagcugaau ugaggu uugga g  accaaaucuu        cugc  a
 ||||||||||| |||||| ||||| |  ||||||||||        ||||   
 cuguugacuug acucua aaccu c  ugguuuagaa        gacg  c
a           u      u     c uu          cagaacga    uu
Get sequence
Deep sequencing
1 reads, 1 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr8: 1202490-1202589 [+]
intergenic
Clustered miRNAs
< 10kb from osa-MIR2275b
osa-MIR2275b Chr8: 1202490-1202589 [+]
osa-MIR2275a Chr8: 1204975-1205135 [+]

Mature sequence osa-miR2275b

Accession MIMAT0011759
Sequence

66 -  

uuugguuuccuccaauaucuca

 - 87

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice" Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH Genome Res. 19:1429-1440(2009).