miRBase entry: dme-mir-2282

Stem-loop dme-mir-2282


Accession
MI0011292
Description
Drosophila melanogaster dme-mir-2282 precursor miRNA


Sequence

35 reads, 6 reads per million, 18 experiments
gccugcauaacgcuguggcuuuccgcuucuauuuuucguucacugccuugugcuucguuggaaaAUCGGUGAGCUAAAAAUAGAAUucgguugccacgcuucaaggg
.(((.......((.(((((...(((.((((((((((.((((((((.....(.(......).)....)))))))).))))))))))..)))..)))))))....))).

Structure
g   gcauaac  u     uuu   -c          c        ccuug g uu 
 ccu       gc guggc   ccg  uucuauuuuu guucacug     u c  c
 |||       || |||||   |||  |||||||||| ||||||||     | |   
 gga       cg caccg   ggc  AAGAUAAAAA CGAGUGGC     a g  g
g   ---acuu  -     -uu   uU          U        -UAaa g uu 


Annotation confidence Not enough data
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Genome context
chr3L: 3412145-3412251 [-]

Database links

Mature dme-miR-2282-3p

Accession MIMAT0011790
Description Drosophila melanogaster dme-miR-2282-3p mature miRNA
Sequence 65 - AUCGGUGAGCUAAAAAUAGAAU - 86
Evidence experimental
454 [1]
Database links

References

  1. PubMed ID: 19541914
    Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line
    "Lau NC, Robine N, Martin R, Chung WJ, Niki Y, Berezikov E, Lai EC"
    "Genome Res (2009) 19:1776-1785