miRBase entry: bta-mir-2316

Stem-loop bta-mir-2316


Accession
MI0011336
Description
Bos taurus bta-mir-2316 precursor miRNA

Literature search
1 open access papers mention bta-mir-2316
(1 sentences)

Sequence

53 reads, 4 reads per million, 18 experiments
cgcuaucccACUCCGGCCUGGACUGCGGCGGGaggcugcugucgccgcccagcccuugcuggagccuaucuagug
(((((.....(((((((..((.(((.(((((..(((....))).)))))))).))..)))))))......)))))

Structure
     -ucccA       CU  A   C     Ga   u 
cgcua      CUCCGGC  GG CUG GGCGG  ggc g
|||||      |||||||  || ||| |||||  |||  
gugau      gaggucg  cc gac ccgcc  cug c
     cuaucc       uu  c   -     -g   u 


Annotation confidence Not enough data
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Genome context
chr15: 47491046-47491120 [+]

Database links

Mature bta-miR-2316

Accession MIMAT0011837
Description Bos taurus bta-miR-2316 mature miRNA
Sequence 10 - ACUCCGGCCUGGACUGCGGCGGG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349