miRBase entry: bta-mir-2330

Stem-loop bta-mir-2330


Accession
MI0011356
Description
Bos taurus bta-mir-2330 precursor miRNA


Sequence

38 reads, 5 reads per million, 4 experiments
gagugagggaUGGGCUUGGGCAGUGAGGACUGGggguccagcccaucucccACUCCUUACCCCUGGCCGUCccuccuu
(((.(((((((((.(..(((..(((((((.((((((..........)))))).)))))))))).).))))))))))))

Structure
   u         G UU   CA       C      ucca 
gag gagggaUGG C  GGG  GUGAGGA UGGggg    g
||| ||||||||| |  |||  ||||||| ||||||     
uuc cuccCUGCC G  CCC  CAUUCCU Acccuc    c
   -         G -U   --       C      uacc 


Annotation confidence Not enough data
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Genome context
chr18: 56523420-56523497 [-]

Database links

Mature bta-miR-2330-5p

Accession MIMAT0011861
Description Bos taurus bta-miR-2330-5p mature miRNA
Sequence 11 - UGGGCUUGGGCAGUGAGGACUGG - 33
Evidence experimental
Illumina [1]

Mature bta-miR-2330-3p

Accession MIMAT0011862
Description Bos taurus bta-miR-2330-3p mature miRNA
Sequence 52 - ACUCCUUACCCCUGGCCGUC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349