Stem-loop sequence bta-mir-2333

AccessionMI0011359 (change log)
DescriptionBos taurus miR-2333 stem-loop
Stem-loop 
   u         a     ca       uu  u 
5'  uagcaaugc gacuc  gggcccu  gg u
    ||||||||| |||||  |||||||  || g
3'  auuguuacg cugag  cccgggg  uc a
   a         a     ag       cc  g
Get sequence
Deep sequencing
5 reads, 0 reads per million, 4 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr19: 18920681-18920743 [-]
intergenic
Clustered miRNAs
< 10kb from bta-mir-2333
bta-mir-2333chr19: 18920681-18920743 [-]
bta-mir-365-2chr19: 18918387-18918497 [-]
Database links

Mature sequence bta-miR-2333

Accession MIMAT0011866
Sequence

4 -  

gcaaugcagacuccagggccc

 - 24

Get sequence
Deep sequencing4 reads, 3 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:19633723 "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection" Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ PLoS One. 4:e6349(2009).