miRBase entry: bta-mir-2338

Stem-loop bta-mir-2338


Accession
MI0011365
Description
Bos taurus bta-mir-2338 precursor miRNA


Sequence

12 reads, 3 reads per million, 3 experiments
cagggAGGCUGAGGACAGGGGCUGACGUucauuuucuacaagugugcgucugccccugggcacagcaccccug
(((((..((((.(..(((((((.(((((.(((((.....))))).))))).)))))))..).))))..)))))

Structure
     AG    A GA       U     u     u 
caggg  GCUG G  CAGGGGC GACGU cauuu c
|||||  |||| |  ||||||| ||||| ||||| u
guccc  cgac c  guccccg cugcg gugaa a
     ca    a gg       u     u     c 


Annotation confidence Not enough data
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Genome context
chr19: 27440238-27440310 [+]

Database links

Mature bta-miR-2338

Accession MIMAT0011872
Description Bos taurus bta-miR-2338 mature miRNA
Sequence 6 - AGGCUGAGGACAGGGGCUGACGU - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349