miRBase entry: bta-mir-2284u

Stem-loop bta-mir-2284u


Accession
MI0011387
Description
Bos taurus bta-mir-2284u precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
13 open access papers mention bta-mir-2284u
(32 sentences)

Sequence

21 reads, 2 reads per million, 8 experiments
gccaacugcuaggagcccgacacguacgcuaggggcuggcccAAAAGUUCGUUCGGUUUUUCUgcccaauguuggc
((((((.((.(((((.((((.(((.((....(((.....)))....)).)))))))..))))))).....))))))

Structure
      ----u  u     -c    c   u  gcua   g 
gccaac     gc aggag  ccga acg ac    ggg c
||||||     || |||||  |||| ||| ||    ||| u
cgguug     cg UCUUU  GGCU UGC UG    ccc g
      uaacc  -     UU    -   U  AAAA   g 


Annotation confidence Not enough data
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Genome context
chr2: 131328372-131328447 [+]

Database links

Mature bta-miR-2284u

Accession MIMAT0011895
Description Bos taurus bta-miR-2284u mature miRNA
Sequence 43 - AAAAGUUCGUUCGGUUUUUCU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349