miRBase entry: bta-mir-2382

Stem-loop bta-mir-2382


Accession
MI0011419
Description
Bos taurus bta-mir-2382 precursor miRNA

Literature search
1 open access papers mention bta-mir-2382
(1 sentences)

Sequence

18 reads, 4 reads per million, 10 experiments
gcugcacuuguAGGGGAGUGCCUGGGAAGCUGUuccuuuuggccgaCUACUUCCUGGUGCCUCGCCCCACacccagc
((((....(((.((((((.((((((((((..(((((....))..)))..)))))))).))))).))).)))..))))

Structure
    cacu   A   -   U  -        CU   --  u 
gcug    ugu GGG GAG GC CUGGGAAG  GUu  cc u
||||    ||| ||| ||| || ||||||||  |||  ||  
cgac    aCA CCC CUC CG GGUCCUUC  Cag  gg u
    --cc   C   G   -  U        AU   cc  u 


Annotation confidence Not enough data
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Genome context
chr25: 1755398-1755474 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2382
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2382-5p

Accession MIMAT0011930
Description Bos taurus bta-miR-2382-5p mature miRNA
Sequence 12 - AGGGGAGUGCCUGGGAAGCUGU - 33
Evidence experimental
Illumina [1]

Mature bta-miR-2382-3p

Accession MIMAT0011931
Description Bos taurus bta-miR-2382-3p mature miRNA
Sequence 47 - CUACUUCCUGGUGCCUCGCCCCAC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349