Stem-loop bta-mir-2388

Accession

MI0011428

Description

Bos taurus bta-mir-2388 precursor miRNA

Sequence

68 reads, 11 reads per million, 23 experiments

cauaaggagucAGCUCCCGUCUCCUCUGUGCUGAgucacaaggaucgcaGCUCGAGGAAGCUGGAGAUGAcuugugaug
(((.(.((((((.((((.((.(((((.(.((((.(((.....)).).)))).)))))).)).)))).)))))).).)))

Structure

   a g      G    C  C     U U    A -  a 
cau a gagucA CUCC GU UCCUC G GCUG g uc c
||| | |||||| |||| || ||||| | |||| | || a
gua u uucAGU GAGG CG AGGAG C CGac c ag a
   g g      A    U  A     - U    g u  g 

Annotation confidence High

Genome context

chr25: 35471283-35471361 [-]

Mature bta-miR-2388-5p

• Accession: MIMAT0011940
• Description: Bos taurus bta-miR-2388-5p mature miRNA
• Sequence: 12 - AGCUCCCGUCUCCUCUGUGCUGA - 34
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2388-3p

• Accession: MIMAT0011941
• Description: Bos taurus bta-miR-2388-3p mature miRNA
• Sequence: 50 - GCUCGAGGAAGCUGGAGAUGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349