Stem-loop bta-mir-2400

Accession

MI0011441

Description

Bos taurus bta-mir-2400 precursor miRNA

Literature search

3 open access papers mention bta-mir-2400
(8 sentences)

Sequence

89 reads, 16 reads per million, 34 experiments

gagggcugcccgagcgcauguggcugaguguggucccuuggcgcCCAGCACAGGCAGCUCGGACUGAaacccuc
(((((..(.((((((((.((((.(((.((((.(.....).)))).))))))).)).)))))).).....)))))

Structure

     ---cu c      -  a    g   a    g u 
gaggg     g ccgagc gc ugug cug gugu g c
|||||     | |||||| || |||| ||| |||| | c
cuccc     C GGCUCG CG ACAC GAC cgcg u c
     aaAGU A      A  G    -   C    g u 

Annotation confidence Not enough data

Genome context

chr27: 33396764-33396837 [-]

Mature bta-miR-2400

• Accession: MIMAT0011956
• Description: Bos taurus bta-miR-2400 mature miRNA
• Sequence: 45 - CCAGCACAGGCAGCUCGGACUGA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349