Stem-loop bta-mir-2404-1

Accession

MI0011446

Description

Bos taurus bta-mir-2404-1 precursor miRNA

Literature search

3 open access papers mention bta-mir-2404-1
(3 sentences)

Sequence

83020 reads, 23.0 reads per million, 242 experiments

aUUGCACUGCAUGGUAUCUGCauucagcaguuuguuccugcuggcugUUCAAAAGACAGUGCGAU
(((((((((..(.......(((.(((((((.......))))))).))).....)..)))))))))

Structure

         CA GGUAUCU   u       uu 
aUUGCACUG  U       GCa ucagcag  u
|||||||||  |       ||| |||||||  g
UAGCGUGAC  A       Ugu ggucguc  u
         AG --AAACU   c       cu 

Annotation confidence Medium

Genome context

29: 1089784-1089848 [+]

Mature bta-miR-2404-5p

• Accession: MIMAT0011961
• Description: Bos taurus bta-miR-2404-5p mature miRNA
• Sequence: 2 - UUGCACUGCAUGGUAUCUGC - 21
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2404-1-3p

• Accession: MIMAT0050933
• Description: Bos taurus bta-miR-2404-1-3p mature miRNA
• Sequence: 48 - UUCAAAAGACAGUGCGAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349