miRBase entry: bta-mir-2284m

Stem-loop bta-mir-2284m


Accession
MI0011459
Description
Bos taurus bta-mir-2284m precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
13 open access papers mention bta-mir-2284m
(32 sentences)

Sequence

19 reads, 3 reads per million, 6 experiments
guuggccaGAAAAGUUUGUUCGGGUUUUccagaggguguuacccaucaaaugaacuuuucagccaac
((((((..((((((((((((.((((...((....))....))))....)))))))))))).))))))

Structure
      ca            ---C    -UUU  a 
guuggc  GAAAAGUUUGUU    GGGU    cc g
||||||  ||||||||||||    ||||    ||  
caaccg  cuuuucaaguaa    ccca    gg a
      -a            acua    uugu  g 


Annotation confidence Not enough data
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Genome context
chr2: 118676795-118676861 [-]

Database links

Mature bta-miR-2284m

Accession MIMAT0011976
Description Bos taurus bta-miR-2284m mature miRNA
Sequence 9 - GAAAAGUUUGUUCGGGUUUU - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349