miRBase entry: bta-mir-677

Stem-loop bta-mir-677


Accession
MI0011482
Description
Bos taurus bta-mir-677 precursor miRNA
Gene family
MIPF0000811; mir-677


Sequence

226 reads, 16 reads per million, 63 experiments
CUCACUGAUGAGCAGCUUCUGACuuucguucuucugaguuugcugaagccagaugccauuucugag
((((..((((.(((...((((.((((.((((....))....)).)))).)))))))))))..))))

Structure
    CU    A   GCU    A    c  ----  u 
CUCA  GAUG GCA   UCUG Cuuu gu    uc u
||||  |||| |||   |||| |||| ||    ||  
gagu  uuac cgu   agac gaag cg    ag c
    cu    -   ---    c    u  uuug  u 


Annotation confidence Not enough data
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Genome context
chr5: 57298281-57298346 [+]

Database links

Mature bta-miR-677

Accession MIMAT0012003
Description Bos taurus bta-miR-677 mature miRNA
Sequence 1 - CUCACUGAUGAGCAGCUUCUGAC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349