miRBase entry: bta-mir-2436

Stem-loop bta-mir-2436


Accession
MI0011487
Description
Bos taurus bta-mir-2436 precursor miRNA


Sequence

17 reads, 7 reads per million, 10 experiments
agcagggugCGGCGCAGCUGUCGGGAGGGCGcguccccguccccgucCCCGCCCGACCGCCUCGCCCAAcccucu
((.(((((..((((..((.((((((.(((.(((..........))).))).)))))).))..))))..)))))))

Structure
  c     gC    CA  U      A   C   uccc 
ag agggu  GGCG  GC GUCGGG GGG Gcg    c
|| |||||  ||||  || |||||| ||| |||     
uc ucccA  CCGC  CG CAGCCC CCC ugc    g
  -     AC    UC  C      G   c   cccu 


Annotation confidence Not enough data
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Genome context
chr5: 84472387-84472461 [-]

Database links

Mature bta-miR-2436-5p

Accession MIMAT0012008
Description Bos taurus bta-miR-2436-5p mature miRNA
Sequence 10 - CGGCGCAGCUGUCGGGAGGGCG - 31
Evidence experimental
Illumina [1]

Mature bta-miR-2436-3p

Accession MIMAT0012009
Description Bos taurus bta-miR-2436-3p mature miRNA
Sequence 48 - CCCGCCCGACCGCCUCGCCCAA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349