Stem-loop bta-mir-2284h

Accession

MI0011497

Description

Bos taurus bta-mir-2284h precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

13 open access papers mention bta-mir-2284h
(32 sentences)

Sequence

4655 reads, 249 reads per million, 59 experiments

guuggCCCAAAAGUUCGUUCGGGUUUccuguaugugacggaaaaACCCCAAUGAGCUUUUGACCaac
(((((..((((((((((((.((((((.((((.....))))..)))))).)))))))))))).)))))

Structure

     CC            C      -c    a 
guugg  CAAAAGUUCGUU GGGUUU  cugu u
|||||  |||||||||||| ||||||  |||| g
caaCC  GUUUUCGAGUAA CCCAaa  ggca u
     -A            C      aa    g 

Annotation confidence Not enough data

Genome context

chr5: 118691017-118691083 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2284h

Mature bta-miR-2284h-5p

• Accession: MIMAT0012019
• Description: Bos taurus bta-miR-2284h-5p mature miRNA
• Sequence: 6 - CCCAAAAGUUCGUUCGGGUUU - 26
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2284h-3p

• Accession: MIMAT0012020
• Description: Bos taurus bta-miR-2284h-3p mature miRNA
• Sequence: 45 - ACCCCAAUGAGCUUUUGACC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349