miRBase entry: bta-mir-2448

Stem-loop bta-mir-2448


Accession
MI0011502
Description
Bos taurus bta-mir-2448 precursor miRNA

Literature search
2 open access papers mention bta-mir-2448
(2 sentences)

Sequence

114 reads, 16 reads per million, 27 experiments
ugcacCUGCGGAUACAACCAAACACGGuuggagaauauuucacaaucuGUGGUUGAUUGGAUCCGUGGGUgua
((((((((((((..(((.((..((((((((((((...)))).))).)))))..)).)))..))))))))))))

Structure
            UA   C  AA     -   -    a 
ugcacCUGCGGA  CAA CA  CACGG uug gaga  
||||||||||||  ||| ||  ||||| ||| |||| u
augUGGGUGCCU  GUU GU  GUGuc aac cuuu  
            AG   A  UG     u   a    a 


Annotation confidence High
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Genome context
chr6: 116014595-116014667 [-]

Database links

Mature bta-miR-2448-5p

Accession MIMAT0012025
Description Bos taurus bta-miR-2448-5p mature miRNA
Sequence 6 - CUGCGGAUACAACCAAACACGG - 27
Evidence experimental
Illumina [1-2]

Mature bta-miR-2448-3p

Accession MIMAT0012026
Description Bos taurus bta-miR-2448-3p mature miRNA
Sequence 49 - GUGGUUGAUUGGAUCCGUGGGU - 70
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349

  2. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026