Stem-loop bta-mir-1777a

Accession

MI0011508

Description

Bos taurus bta-mir-1777a precursor miRNA

Literature search

2 open access papers mention bta-mir-1777a
(2 sentences)

Sequence

9 reads, 1 reads per million, 6 experiments

gcaugggguuccgagUGGGGGCGGUGGGGGGCGGGucugagccggccucugggcccagccagggucgcuccggggu
.(.(((((((((..((..((((....((((((.(((....))).))))))..)))).))..)))..)))))).)..

Structure

-g a      --   ga  GG    GGUG      G   c 
  c uggggu  ucc  gU  GGGC    GGGGGC GGu u
  | ||||||  |||  ||  ||||    |||||| |||  
  g gccucg  ggg  cg  cccg    ucuccg ccg g
ug g      cu   ac  -a    --gg      g   a 

Annotation confidence Low

Genome context

chr6: 107617597-107617672 [-]

Mature bta-miR-1777a

• Accession: MIMAT0012032
• Description: Bos taurus bta-miR-1777a mature miRNA
• Sequence: 16 - UGGGGGCGGUGGGGGGCGGG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349