miRBase entry: bta-mir-2454

Stem-loop bta-mir-2454


Accession
MI0011511
Description
Bos taurus bta-mir-2454 precursor miRNA

Literature search
2 open access papers mention bta-mir-2454
(5 sentences)

Sequence

79 reads, 13 reads per million, 34 experiments
cccugugaCUGGGGGCUGCCAGGCAGGAGGCguggcuccuggugUCUCCUCUGGCCGCUCUCCUccccaggg
(((((.....((((((.(((((..(((((((((........)))))))))))))).)))))).....)))))

Structure
     ugaCU      U     GC         ggc 
cccug     GGGGGC GCCAG  AGGAGGCgu   u
|||||     |||||| |||||  |||||||||    
gggac     CUCUCG CGGUC  UCCUCUgug   c
     cccUC      C     --         guc 


Annotation confidence High
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Genome context
chr7: 15988170-15988241 [-]

Database links

Mature bta-miR-2454-5p

Accession MIMAT0012035
Description Bos taurus bta-miR-2454-5p mature miRNA
Sequence 9 - CUGGGGGCUGCCAGGCAGGAGGC - 31
Evidence experimental
Illumina [1]

Mature bta-miR-2454-3p

Accession MIMAT0012036
Description Bos taurus bta-miR-2454-3p mature miRNA
Sequence 45 - UCUCCUCUGGCCGCUCUCCU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349