miRBase entry: bta-mir-1434

Stem-loop bta-mir-1434


Accession
MI0011514
Description
Bos taurus bta-mir-1434 precursor miRNA
Gene family
MIPF0000775; mir-1434

Literature search
2 open access papers mention bta-mir-1434
(2 sentences)

Sequence

96 reads, 29 reads per million, 36 experiments
caccuuGUACAUGAUGACUAAAAUUUCUucacuuugaccugauggcuauuGAAGAAAUCUAAGGUCUGAGGug
(((((((........((((...(((((((((....(.((....)))...)))))))))....)))))))))))

Structure
       UACAUGAU    -AAA         cuuu a  u 
caccuuG        GACU    AUUUCUuca    g cc g
|||||||        ||||    |||||||||    | ||  
guGGAGU        CUGG    UAAAGAAGu    c gg a
       --------    AAUC         -uau -  u 


Annotation confidence Not enough data
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Genome context
chr7: 21336498-21336570 [+]

Database links

Mature bta-miR-1434-5p

Accession MIMAT0012039
Description Bos taurus bta-miR-1434-5p mature miRNA
Sequence 7 - GUACAUGAUGACUAAAAUUUCU - 28
Evidence experimental
Illumina [1]

Mature bta-miR-1434-3p

Accession MIMAT0012040
Description Bos taurus bta-miR-1434-3p mature miRNA
Sequence 51 - GAAGAAAUCUAAGGUCUGAGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349