Stem-loop sequence bta-mir-2404-2

Accession

MI0011535

Description

Bos taurus miR-2404-2 stem-loop

Gene family

MIPF0000776; mir-2404

Stem-loop

          ca gguaucu   uu      uu 
uguugcacug  u       gca  cagcag  u
||||||||||  |       |||  ||||||  g
auagcgugac  a       ugu  gucguc  u
          ag --aaacu   cg      cu 

Genome context

• Coordinates (UMD3.1): chr8: 74374393-74374459 [-]
• Overlapping transcripts:

  sense

  ENSBTAT00000060095 ; exon 1

  ENSBTAT00000060095 ; exon 1

  ENSBTAT00000036468 ; intron 5

  ENSBTAT00000064321 ; intron 5

Database links

• ENTREZGENE: 100313446;MIR2404-2

Mature sequence bta-miR-2404

• Accession: MIMAT0011961
• Sequence: 3 - uugcacugcaugguaucugc - 22
• Evidence: experimental; Solexa [1]

References

1. PMID:19633723 "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection" Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ PLoS One. 4:e6349(2009).