miRBase entry: bta-mir-2478

Stem-loop bta-mir-2478


Accession
MI0011540
Description
Bos taurus bta-mir-2478 precursor miRNA

Literature search
6 open access papers mention bta-mir-2478
(39 sentences)

Sequence

3177 reads, 207 reads per million, 69 experiments
guugggggucgguggugagcaagcagagacuacauagguugccuuGUAUCCCACUUCUGACACCAuguauugucaac
(((((.(((..((((((((.(((..(.((.((((.(((...))))))))))..)))))..))))))..))).)))))

Structure
     g   cg      --  c   ca a  c    u   u 
guugg ggu  guggug  ag aag  g ga uaca agg  
||||| |||  ||||||  || |||  | || |||| ||| u
caacu uua  uACCAC  UC UUC  C CU AUGu ucc  
     g   ug      AG  -   AC -  -    -   g 


Annotation confidence Not enough data
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Genome context
chr9: 28165967-28166043 [-]

Database links

Mature bta-miR-2478

Accession MIMAT0012070
Description Bos taurus bta-miR-2478 mature miRNA
Sequence 46 - GUAUCCCACUUCUGACACCA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349