Stem-loop sequence dme-mir-307b

Accession MI0011577
Previous IDs dme-mir-307-as
Description Drosophila melanogaster miR-307b stem-loop
Gene family MIPF0000937; mir-307as
Stem-loop 
u    uc ug auacuc    c    a c          gga  u       gauaccau 
 aguu  g  g      uguc ugcu u gcucacucaa   gg ugugaug        a
 ||||  |  |      |||| |||| | ||||||||||   || |||||||         
 ucaa  c  c      acag acga a ugagugaguu   cc acacuac        u
u    -u gu -guaaa    a    a c          gga  c       aauaaagc
Get sequence
Deep sequencing
3051 reads, 37 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
2R: 5508739-5508858 [+]
antisense
FBtr0088501 ; Mmp2-RB; intron 3
FBtr0088501 ; Mmp2-RB; intron 3
FBtr0088501 ; Mmp2-RB; intron 3
Clustered miRNAs
< 10kb from dme-mir-307b
dme-mir-307b 2R: 5508739-5508858 [+]
dme-mir-307a 2R: 5508756-5508843 [-]

Mature sequence dme-miR-307b-5p

Accession MIMAT0012194
Previous IDs dme-miR-307-as*
Sequence

32 -  

ucacucaaggagguugugaugg

 - 53

Get sequence
Deep sequencing 21 reads, 10 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence dme-miR-307b-3p

Accession MIMAT0012195
Previous IDs dme-miR-307-as
Sequence

73 -  

ucacacccagguugagugaguc

 - 94

Get sequence
Deep sequencing 3016 reads, 37 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20037610 "Evolutionary flux of canonical microRNAs and mirtrons in Drosophila" Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC Nat Genet. 42:6-9(2010).