miRBase entry: dme-mir-2489

Stem-loop dme-mir-2489


Accession
MI0011578
Description
Drosophila melanogaster dme-mir-2489 precursor miRNA
Gene family
MIPF0000953; mir-2489


Sequence

355 reads, 24 reads per million, 35 experiments
gcaaUAAGUUAGACGUGAGUAUGGCUAUACAAAucaucuggaacguaaguucuaauguaugUAUUGUAUGUUGUAUUUGCAGUuuuaugauagca
((.((..((.(((((((((((((((.((((((..((((((((((....))))))..).)))..))))))))))))))))).)))).)).)).)).

Structure
-  a  AA  U    -           U      Au   - --      g 
 gc aU  GU AGAC GUGAGUAUGGC AUACAA  cau c  uggaac u
 || ||  || |||| ||||||||||| ||||||  ||| |  ||||||  
 cg ua  ua uuUG CGUUUAUGUUG UAUGUU  gua g  aucuug a
a  a  -g  u    A           -      AU   u ua      a 


Annotation confidence Not enough data
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Genome context
chr2L: 13609974-13610068 [+]

Database links

Mature dme-miR-2489-3p

Accession MIMAT0012196
Description Drosophila melanogaster dme-miR-2489-3p mature miRNA
Sequence 62 - UAUUGUAUGUUGUAUUUGCAGU - 83
Evidence experimental
Illumina [1]
Database links

Mature dme-miR-2489-5p

Accession MIMAT0020910
Description Drosophila melanogaster dme-miR-2489-5p mature miRNA
Sequence 5 - UAAGUUAGACGUGAGUAUGGCUAUACAAA - 33
Evidence not_experimental

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9