miRBase entry: dme-mir-2496

Stem-loop dme-mir-2496


Accession
MI0011585
Description
Drosophila melanogaster dme-mir-2496 precursor miRNA


Sequence

18 reads, 37 reads per million, 8 experiments
gugcgccgguGUGCGUGUGUGAGAGGCCAUCGUAaaagccuuguuugcgugcggaauuuaacuguuuucucgccgucugcgaauuGCGGGGCACUCACACACGCAUAuucagccgcac
((((((.((((((((((((((((..(((.((((((.....((((..(((.((((((..........))).))))))..)))).))))))))).))))))))))))))))..).)))))

Structure
     - -c                AG   A      aagcc    uu   u   -   uuua 
gugcg c  gguGUGCGUGUGUGAG  GCC UCGUAa     uugu  gcg gcg gaa    a
||||| |  ||||||||||||||||  ||| ||||||     ||||  ||| ||| |||     
cacgc g  uuAUACGCACACACUC  CGG GGCGuu     agcg  ugc cgc cuu    c
     c ac                -A   -      ----a    uc   -   u   uugu 


Annotation confidence Not enough data
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Genome context
chrX: 2010300-2010417 [+]

Database links

Mature dme-miR-2496-5p

Accession MIMAT0012206
Description Drosophila melanogaster dme-miR-2496-5p mature miRNA
Sequence 11 - GUGCGUGUGUGAGAGGCCAUCGUA - 34
Evidence experimental
Illumina [1]
Database links

Mature dme-miR-2496-3p

Accession MIMAT0012207
Description Drosophila melanogaster dme-miR-2496-3p mature miRNA
Sequence 86 - GCGGGGCACUCACACACGCAUA - 107
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9