miRBase entry: dps-mir-989

Stem-loop dps-mir-989


Accession
MI0011591
Description
Drosophila pseudoobscura dps-mir-989 precursor miRNA
Gene family
MIPF0000885; mir-989


Sequence

acguugcgggaaugggccacuaccucgcagucacgugauaucggaaugcaaugaucuacguuaaauuguguuucuuuuugaauaguucaUGUGAUGUGACGUAGUGGAACAuuccuggcg
.(((..((((((((..(((((((.(((((.((((((((....((((((((((............))))))))))............))))))))))))).)))))))..)))))))))))

Structure
a   ug        gg       c     g        --------uauc          gaucu 
 cgu  cgggaaug  ccacuac ucgca ucacguga            ggaaugcaau     a
 |||  ||||||||  ||||||| ||||| ||||||||            ||||||||||      
 gcg  guccuuAC  GGUGAUG AGUGU AGUGUacu            cuuuguguua     c
-   --        AA       C     -        ugauaaguuuuu          aauug 


Annotation confidence Not enough data
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Genome context
3: 2729300-2729419 [-]

Database links

Mature dps-miR-989

Accession MIMAT0012218
Description Drosophila pseudoobscura dps-miR-989 mature miRNA
Sequence 90 - UGUGAUGUGACGUAGUGGAACA - 111
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9