Stem-loop dps-mir-988

Accession

MI0011599

Description

Drosophila pseudoobscura dps-mir-988 precursor miRNA

Gene family

MIPF0000724; mir-988

Sequence

gacuguggacauuuuggguGUGUGAUUUGUGGCAAAGUGAUaugcauuugaucauCCCCUUGUUGCAAACCUCACGCcaaaguugaaucccacaccuacacucuc
...(((((.((.(((.((((((.(.((((((((((.(((((.........)))))....)))))))))).).)))))).))).))....)))))...........

Structure

--------gac     ---a  u   g      U A          ---A     aug 
           ugugg    ca uuu gguGUG G UUUGUGGCAA    GUGAU   c
           |||||    || ||| |||||| | ||||||||||    |||||   a
           acacc    gu gaa cCGCAC C AAACGUUGUU    uacua   u
cucucacaucc     cuaa  u   a      U C          CCCC     guu 

Annotation confidence Not enough data

Genome context

3: 405638-405742 [-]

Mature dps-miR-988-5p

• Accession: MIMAT0012233
• Description: Drosophila pseudoobscura dps-miR-988-5p mature miRNA
• Sequence: 20 - GUGUGAUUUGUGGCAAAGUGAU - 41
• Evidence: experimental ; Illumina [1]

Mature dps-miR-988-3p

• Accession: MIMAT0012234
• Description: Drosophila pseudoobscura dps-miR-988-3p mature miRNA
• Sequence: 56 - CCCCUUGUUGCAAACCUCACGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9