Stem-loop dps-mir-965

Accession

MI0011607

Description

Drosophila pseudoobscura dps-mir-965 precursor miRNA

Gene family

MIPF0000708; mir-965

Sequence

gcucaaaaauuugaGGGGUCAAACUGUACGUUCUAUGugacaauauucgaaauucaUAAGCGUAUAGCUUUUCCCCUUaaaacuugaugca
((((((...(((((((((..((.(((((((((.((((.................))))))))))))).))..)))))))))..)))).)).

Structure

-  -    aaa         UC  A         C    ugacaau 
 gc ucaa   uuugaGGGG  AA CUGUACGUU UAUG       a
 || ||||   |||||||||  || ||||||||| ||||       u
 cg aguu   aaaUUCCCC  UU GAUAUGCGA AUac       u
a  u    -ca         UU  C         -    uuaaagc 

Annotation confidence Not enough data

Genome context

4_group1: 4362162-4362252 [+]

Mature dps-miR-965-5p

• Accession: MIMAT0012249
• Description: Drosophila pseudoobscura dps-miR-965-5p mature miRNA
• Sequence: 15 - GGGGUCAAACUGUACGUUCUAUG - 37
• Evidence: experimental ; Illumina [1]

Mature dps-miR-965-3p

• Accession: MIMAT0012250
• Description: Drosophila pseudoobscura dps-miR-965-3p mature miRNA
• Sequence: 57 - UAAGCGUAUAGCUUUUCCCCUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9