miRBase entry: dps-mir-375

Stem-loop dps-mir-375


Accession
MI0011609
Description
Drosophila pseudoobscura dps-mir-375 precursor miRNA
Gene family
MIPF0000114; mir-375


Sequence

gggcagcgaauuACUUGGGCCAGGGGAAUUCAAACUgugaucgcaaugcaaaaagUUUGUUCGUUUGGCUUAAGUUAuuuucaugccuc
((((((.((((.((((((((((((.(((..((((((......((...))....))))))))).)))))))))))).)))).).))))).

Structure
-     - c    u            G   UU      gugauc  a 
 gggca g gaau ACUUGGGCCAGG GAA  CAAACU      gc  
 ||||| | |||| |||||||||||| |||  ||||||      || a
 uccgu c uuuA UGAAUUCGGUUU CUU  GUUUga      cg  
c     a u    U            G   --      --aaaa  u 


Annotation confidence Not enough data
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Genome context
4_group3: 5649122-5649210 [+]

Database links

Mature dps-miR-375-5p

Accession MIMAT0012253
Description Drosophila pseudoobscura dps-miR-375-5p mature miRNA
Sequence 13 - ACUUGGGCCAGGGGAAUUCAAACU - 36
Evidence experimental
Illumina [1]

Mature dps-miR-375-3p

Accession MIMAT0012254
Description Drosophila pseudoobscura dps-miR-375-3p mature miRNA
Sequence 56 - UUUGUUCGUUUGGCUUAAGUUA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9